PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10014324
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 338aa    MW: 35954.4 Da    PI: 6.5284
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10014324genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.74.5e-22243305163
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  e+e+kr++rkq+NRe+ArrsR+RK+ae+eeL+ kv++L + N+ Lk+el +l++e++klk+e+
  Lus10014324 243 EREVKRQKRKQSNRESARRSRLRKQAECEELQHKVENLNSDNHNLKNELLRLSEECEKLKAEN 305
                  799*********************************************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.2E-20189IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165963.8E-6116214No hitNo description
Gene3DG3DSA:1.20.5.1702.1E-17240303No hitNo description
SMARTSM003385.4E-20243307IPR004827Basic-leucine zipper domain
PfamPF001703.8E-19243305IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.07245308IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-11246302No hitNo description
CDDcd147022.42E-22248298No hitNo description
PROSITE patternPS000360250265IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0010629Biological Processnegative regulation of gene expression
GO:0090342Biological Processregulation of cell aging
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MGTGEENTPA KPSKPAASST QEAPTTPAYP EWPGSMQVYY GAGATPPFFP SSVASPHPYV  60
YQHPMMPHYG TPVPYPAMYP GGVYAHPNMA MTPNSMAPSM EMEGKAANGK DQPSGKKSKG  120
ASASKGGESR KVASGSGNDA VSQSGESGSD GSSDGSDEQQ EYTGRKKGSF NQMLADANAQ  180
NNTAAPNAQG AFPVVSVPGT NLNIGMDLWN ASPAAAALGT AKMRSGGTSG IVPTPEQWGQ  240
QDEREVKRQK RKQSNRESAR RSRLRKQAEC EELQHKVENL NSDNHNLKNE LLRLSEECEK  300
LKAENDSIKK KLKESYGQEA TDQLEQNDSG RGDEGNS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1259265RRSRLRK
2259266RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00039PBMTransfer from AT4G36730Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010999953.11e-144PREDICTED: G-box-binding factor 1-like
SwissprotP427741e-97GBF1_ARATH; G-box-binding factor 1
TrEMBLB9SGI71e-143B9SGI7_RICCO; G-box-binding factor, putative
STRINGPOPTR_0007s12460.11e-142(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF59333450
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.21e-82G-box binding factor 1